BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D10SP1|AL426033
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1051 1439 0.0
>3x_Contig1051
Length = 4315
Score = 1439 bits (726), Expect = 0.0
Identities = 761/770 (98%), Gaps = 2/770 (0%)
Strand = Plus / Plus
Query: 21 catggccttttatcattacctggctctgataaccacaaaccttttgcatggtatgaccat 80
|||||||| || ||||||||| ||||||||||||||||||||||| ||| ||||||| ||
Sbjct: 2078 catggcctattctcattacctagctctgataaccacaaaccttttacatagtatgac-at 2136
Query: 81 ccgtttgcttgat-ttacaataccatgtttccattctcttaacttgatgtggttttcttt 139
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2137 ccgtttgcttgatattacaataccatgtttccattctcataacttgatgtggttttcttt 2196
Query: 140 tccgtgacgatgaacatctttcaagaatccttgggaaaggtataggtatgcatccggtag 199
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2197 tccgtgacgatgaacatcttacaagaatccttgggaaaggtataggtatgcatccggtag 2256
Query: 200 atgacctgagacacctggagattggaagaatccattggcatatggagaagctgttattac 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 atgacctgagacacctggagattggaagaatccattggcatatggagaagctgttattac 2316
Query: 260 ttgtccttgaatcgaaggagaatctaataaacgctgttttatttcagggagcatattgaa 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2317 ttgtccttgaatcgaaggagaatctaataaacgctgttttatttcagggagcatattgaa 2376
Query: 320 atatccagcggtaaacgtccatctactcatggggtttgaaagacaagaaaggatggaaag 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2377 atatccagcggtaaacgtccatctactcatggggtttgaaagacaagaaaggatggaaag 2436
Query: 380 gacacccggtttttctgttgacacatcatgatgtggttggaatagtggagtaaattgtga 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2437 gacacccggtttttctgttgacacatcatgatgtggttggaatagtggagtaaattgtga 2496
Query: 440 aactggatagacaatggtaggatattgagaaaaatctttgatcagatgtgcgttacccat 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2497 aactggatagacaatggtaggatattgagaaaaatctttgatcagatgtgcgttacccat 2556
Query: 500 agatgatggtcctcttaaaaaatcagtgaaaatagacgaacatttttcaataaatttatg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 agatgatggtcctcttaaaaaatcagtgaaaatagacgaacatttttcaataaatttatg 2616
Query: 560 tttatctttcaaaggttcaaccgctacatttgattctggccattcaaggtgatatttctg 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2617 tttatctttcaaaggttcaaccgctacatttgattctggccattcaaggtgatatttctg 2676
Query: 620 ttcgttattagcatgacgaaccctgtaactgattttactcactaattgatgaaccttgaa 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 ttcgttattagcatgacgaaccctgtaactgattttactcactaattgatgaaccttgaa 2736
Query: 680 ataatagtccgaaaggaatttatttttgaaaacataatacctatcttgtctattagtgaa 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2737 ataatagtccgaaaggaatttatttttgaaaacataatacctatcttgtctattagtgaa 2796
Query: 740 ataatcattggataggtttgccccacttaatatcacttcttcgtccacac 789
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2797 ataatcattggataggtttgccccacttaatatcacttcttcgtccacac 2846
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6807
Number of Sequences: 1807
Number of extensions: 6807
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)